Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme889178g00001 ATGGATTATAAACCTGCACCCATGGTGGCAATCTTTTCAAGTAGAGGGCCTTCAGGACTTTCAAAGAATATTCTAAAACCTGATATTGCAGCACCAGGTGTTGCCATTCTTGCAGCATGGATTG 124 0.4274 MDYKPAPMVAIFSSRGPSGLSKNILKPDIAAPGVAILAAWI 41
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme889178g00001 41 Gene3D Peptidase S8/S53 domain 4 40 IPR036852 GO:0004252|GO:0006508
Trme889178g00001 41 ProSiteProfiles Serine proteases, subtilase domain profile. 1 41 - -
Trme889178g00001 41 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 40 IPR045051 -
Trme889178g00001 41 SUPERFAMILY Subtilisin-like 5 41 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme889178g00001 Trme-Chr889178 1 211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme889178g00001 4 40 Subtilisin-like Serine Gene Family AT4G34980 72.973 1.39e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme889178g00001 K25898 - tpra:123898882 85.1149