Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88865g00001 ACTGAAGAACTCTTTCTGTTAGAGGCTCATGAACATGAATCATTATATTCCTCATCCTTGCTCGAGGGAAATGGAAATCCTCTGCTTGTAGGTCTCACCCTTATCCACAATGCAGCTACTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTACCATCTGCATCGTGGATATGGATCAGGAGCAAACAGTTGGCTTGTTAATTTAGAGATCAAATATGTCATGCAATACCCAAGATCACTTAGATGA 252 0.4167 TEELFLLEAHEHESLYSSSLLEGNGNPLLVGLTLIHNAATKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEIKYVMQYPRSLR 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88865g00001 83 PANTHER NOTUM-RELATED 28 71 IPR004963 GO:0016787
Trme88865g00001 83 Pfam Pectinacetylesterase 27 71 IPR004963 GO:0016787
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88865g00001 14 71 Carbohydrate Esterase AT3G05910 72.414 1.28e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88865g00001 K19882 - gmx:100782401 91.6633