Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88808g00001 GTTATTGGTGCAGTTGGAATTCCAGTTGAAAAGTTATGTAATGGTACAAAAATTGAAGGCTTTTTCCCTATTCTTAATACTAATGGAAAACCCTTTAAGACTGAAACAGTTTTGAGCTTATCAATTCAGTATACTCCTGTTCATAAGGTAACCCTTTATAGAAACGGTGTTGGTGATGATTATGAAGGTGTTCCTTCTACATATTTTCCGCTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTAGTTTGAAGATTGATGGTGGTCATCATGAGCATGGAGATTGTTGGCATGATATCTTTGATGCAATAAGTCAAGCACGTCGATTAGTGTATATTGTTGGTTGGTCTGTTTATTACAATGTTAGTCTCATTAGGGATACTAGAGATGGAAGAGATTGTACTTTAGGTGAAGTTCTAAAAGCTAAATCACAAGAAGGTGTGAGAGTGCTTCTACTTGTGTGGGATGATCCTACTTCTAAAAGCATGCTTGGACATAAAACAGTAATCATCTTCAACTAA 549 0.3607 VIGAVGIPVEKLCNGTKIEGFFPILNTNGKPFKTETVLSLSIQYTPVHKVTLYRNGVGDDYEGVPSTYFPLRKGGKVTLYQDAHVPQGCLPSLKIDGGHHEHGDCWHDIFDAISQARRLVYIVGWSVYYNVSLIRDTRDGRDCTLGEVLKAKSQEGVRVLLLVWDDPTSKSMLGHKTVIIFN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88808g00001 182 PANTHER PHOSPHOLIPASE D 1 175 IPR015679 -
Trme88808g00001 182 SUPERFAMILY Phospholipase D/nuclease 59 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88808g00001 1 182 Phospholipase D Gene Family (Wang group) AT4G11850 63.784 8.90e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88808g00001 K01115 - gmx:100786241 294.278