Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88710g00001 ATGTCGAAGCATGCATCAATTCAACTATCTGTTGTGAGACTTCATTTGTTCGGACAAGCTGCAGAAGTTGATTCATCACCACAAGCAGAATCGAGAGGACTATTATCTGCAGTGTTGGATTGTGAAAAGCAAAGAGAGCTCGATGATGAATATGTGAATACTTTTAGACTCAAAGCCATGCACAGTAAGGATTCTACAACTTATTCAGACAAAGCAGTTCATTCTCGCGAAGATATTACTCAAGTGTTGAATGAGTTGGACAAAGTTGGATTTGATTTGTACATTCTAGGACAAGGGACAGGTAGAAATTCTTCGGTGTTCTCGGAATTAATGAAATGGACTGATTGTCCTGAACTTGGTGTTATAGGAGACATGGTGGCATCAAATAATTTTGGTTCATGTTCTTCATTACTTGTTGTACAACAGTATGGGTTTGGCGGGATGGTTTTTGAGAATACCACTCATTCTCATNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGTAGAACAATAG 549 0.3424 MSKHASIQLSVVRLHLFGQAAEVDSSPQAESRGLLSAVLDCEKQRELDDEYVNTFRLKAMHSKDSTTYSDKAVHSREDITQVLNELDKVGFDLYILGQGTGRNSSVFSELMKWTDCPELGVIGDMVASNNFGSCSSLLVVQQYGFGGMVFENTTHSHXXXXXXXXXXXXXXXXXXXXXXVEQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88710g00001 182 Coils Coil 180 182 - -
Trme88710g00001 182 PANTHER CATION/H + ANTIPORTER 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme88710g00001 Trme-Chr88710 126 674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88710g00001 1 143 Antiporter Super Family AT2G13620 37.063 3.33e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88710g00001 - - vun:114191181 223.016