Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8869g00001 ATGAATATTACTATCAGAGGAATGAAGATAAGAAAGAAACACAGCCCTCAGGCCTATATGCACCATGTTGAGTTGATTTCAAAACTTAGGCATTCACACTTGGTTAGTTCACTTGGACATTCTTTTGATTGCAACCAGGAAGATTCAAGTGTCAACACTATATTTCTCATATTTGAGTTTGTTCAAGACAAAAGTTTAAGAAGCCGCGTCTCCGTATCAAATGGAGAAAGGCTTTGTTGGACACAAAGAATAGCAGCCACTATCGGAGTTGTGAAAGGCGTTCAATTTTTGCATACAGGGATAGTGCCTGGACTGTACTCAAATAATCTCAAGATAACTGATATTCTTTTGGATAACAATCATAATGTGAAAATAAGCAGTTATAATCTTCCAATCTATGCTGAAAACAAAAGAATGGTCTATAATGGAACTTCTGTTGGAGTAAAAGGAAATCTCCAAGCAAGGATAAATGATGGAGACAAGAATGATGTGTATGATATTGGGGTAATCTTGCTAGAAATCATTCTGGGACGACCAATAATGTTCCACAATGAAGTGGGAATATTAAAAGATCTTGTGAGTATTATTTTCAAGTTTCTCATTTTCCATTAA 612 0.3546 MNITIRGMKIRKKHSPQAYMHHVELISKLRHSHLVSSLGHSFDCNQEDSSVNTIFLIFEFVQDKSLRSRVSVSNGERLCWTQRIAATIGVVKGVQFLHTGIVPGLYSNNLKITDILLDNNHNVKISSYNLPIYAENKRMVYNGTSVGVKGNLQARINDGDKNDVYDIGVILLEIILGRPIMFHNEVGILKDLVSIIFKFLIFH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8869g00001 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8869g00001 203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 182 - -
Trme8869g00001 203 SUPERFAMILY Protein kinase-like (PK-like) 8 186 IPR011009 -
Trme8869g00001 203 Gene3D Transferase(Phosphotransferase) domain 1 3 195 - -
Trme8869g00001 203 Pfam Protein tyrosine and serine/threonine kinase 7 175 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8869g00001 Trme-Chr8869 470 1665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8869g00001 3 191 Miscellaneous Gene Families AT3G03770 53.403 6.28e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trme8869g00001 PK_Tyr_Ser-Thr 1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8869g00001 - - gmx:100785707 324.324