Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme886710g00001 ATGTGTGGAGGATGGTTGGATTTTGTTCGTGGCAATGGCATAAAGGTTGGAGATGTCTGCATTTTCGAACTTAAAGGTGAGTGTGAGTTACGTGTTCGTATCGCAGAG 108 0.4444 MCGGWLDFVRGNGIKVGDVCIFELKGECELRVRIAE 36
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme886710g00001 36 Pfam B3 DNA binding domain 3 34 IPR003340 GO:0003677
Trme886710g00001 36 ProSiteProfiles B3 DNA-binding domain profile. 1 36 IPR003340 GO:0003677
Trme886710g00001 36 CDD B3_DNA 1 34 IPR003340 GO:0003677
Trme886710g00001 36 Gene3D - 1 36 IPR015300 -
Trme886710g00001 36 SUPERFAMILY DNA-binding pseudobarrel domain 1 34 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trme886710g00001 B3 2.4e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme886710g00001 - - tpra:123894208 72.4034