Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme886088g00001 ATGAAATTATGGCCATTTAAAGTAATTGGTGGCCTCGATGATAAACCCATGATTGTTGTCAATTACAACGATGAAGAAAAACAATTTGCTGCTGAGGAAATATCATCCATGGCATTAGCAAAAATGCTTGAGATTGCAGAAGCTTACATTGGGTCAATAGTGAAGGATGTTGTTATAACTGTTCCTGCTTATTTCAATAACTCACAACGCG 211 0.3649 MKLWPFKVIGGLDDKPMIVVNYNDEEKQFAAEEISSMALAKMLEIAEAYIGSIVKDVVITVPAYFNNSQR 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme886088g00001 70 PANTHER HEAT SHOCK PROTEIN 70KDA 1 70 IPR013126 GO:0005524|GO:0140662
Trme886088g00001 70 Pfam Hsp70 protein 1 70 IPR013126 GO:0005524|GO:0140662
Trme886088g00001 70 SUPERFAMILY Actin-like ATPase domain 2 70 IPR043129 -
Trme886088g00001 70 FunFam heat shock 70 kDa protein-like 13 70 - -
Trme886088g00001 70 Gene3D - 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme886088g00001 Trme-Chr886088 1 211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme886088g00001 1 70 Calmodulin-binding Proteins AT1G56410 74.286 1.15e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme886088g00001 K03283 - zof:122009650 113.62