Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88572g00001 ATGGATATGCATGGTGGTATGTCAATGGCACCAAAGTCATCATCAACCAATGGTACCATGATGGGTGGTCACAAGATGCGCGGCATGATGATGCATATGACATTCTTTTGGGGAAAAGATACATTGATTCTCTTTGATGGTTTTCCTTCTCATAACACTGCTTATTATGTATTGGCACTTTTCATGGTTTTCACCATGTCTATCCTCATTGAGTTCATCTCTCATACTCGCTTCATCAAACCTGATACCAACCCTATGGTGGCTCGTCTGCTTCATACACTTCTTCATGTTCTCAGGATGGGCCTAGCTTACTTGGTGATGTTGGCGCTCATGTCTTTCAACGCCGGAGTTTTCTTGGTTGCTGTCCTTGGCCATGCTCTCGGCTTCTTCTTCTTCTTCTTCAGTAGCCGTTCTTTCAAAGAACCACATCAGCGTTTTGATCTTCCTCCTATGGCTTGTTGA 462 0.4394 MDMHGGMSMAPKSSSTNGTMMGGHKMRGMMMHMTFFWGKDTLILFDGFPSHNTAYYVLALFMVFTMSILIEFISHTRFIKPDTNPMVARLLHTLLHVLRMGLAYLVMLALMSFNAGVFLVAVLGHALGFFFFFFSSRSFKEPHQRFDLPPMAC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88572g00001 153 Pfam Ctr copper transporter family 84 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trme88572g00001 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 24 136 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme88572g00001 Trme-Chr88572 97 558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88572g00001 34 153 Inorganic Solute Cotransporters AT5G59030 44.355 3.29e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88572g00001 K14686 - gmx:100306175 176.407