Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88522g00001 ATGCCTATTGGCTATGGTTGCAGCCTCACTCAAACAGTTTTCAATGCGATTAATGTGATGGCTGGAGTTGGACTTTTGTCTACACCTTATACAGTGCAACAAGCCGGTTGGGCGGGCATGGTGGTGATGCTTATTTTTGCAGGTGTTTGTTGTTATACAGCCACCCTTATGAAACGCTGCTTTGAAAGCAGAGAAGGACTTACTAGCTATCCAGATATAGGAGAAGCTGCATTCGGTAGATATGGCCGTATTTTTGTATCT 261 0.4406 MPIGYGCSLTQTVFNAINVMAGVGLLSTPYTVQQAGWAGMVVMLIFAGVCCYTATLMKRCFESREGLTSYPDIGEAAFGRYGRIFVS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88522g00001 87 PANTHER OS05G0424000 PROTEIN-RELATED 15 86 - -
Trme88522g00001 87 Pfam Transmembrane amino acid transporter protein 8 86 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme88522g00001 Trme-Chr88522 183 646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88522g00001 1 86 Amino Acid or Auxin Permease AAAP Family AT2G41190 73.563 1.46e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88522g00001 K15015 - cpap:110822711 152.91