Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme884794g00001 ATGTCTAGAGTAGCCATCTACAAGACGGCGTGGGGAAAAGAAGGAGTTGCACAATCATCTGATTTAATAGCTGCAATTGATGCCGCAATATCAGATGGTGTGGATGTTATTTCAATATCAGATGGTAAAGATAATCTACCATTGTTTGAAGATCCTATAGCTATAGCTACATTTGCAGCAATGGAAAAAGGTGTTTTTGTTTCCACTTC 209 0.3828 MSRVAIYKTAWGKEGVAQSSDLIAAIDAAISDGVDVISISDGKDNLPLFEDPIAIATFAAMEKGVFVSTS 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme884794g00001 70 SUPERFAMILY Subtilisin-like 3 69 IPR036852 GO:0004252|GO:0006508
Trme884794g00001 70 Gene3D Peptidase S8/S53 domain 2 70 IPR036852 GO:0004252|GO:0006508
Trme884794g00001 70 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 70 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme884794g00001 Trme-Chr884794 25 233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme884794g00001 2 70 Subtilisin-like Serine Gene Family AT1G01900 59.420 9.02e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme884794g00001 - - psat:127122029 94.3597