Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88216g00001 ATGGCAACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTGTGACCTGTTTGGAGTTAGGCGAAATATGTAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTCTCTCTGGATTAGGCCATGAAGCTGGTGCTTCTTTAGCATCTCATCCTGACGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGCAGGATTATGACAGCTGCGGCGCAGCTAATCAAGCCTGTTTCACTCGAGCTTGGTGGAAAGAGCCCAATCCTTGTTTTCGAGGATGTTGAACTTGATAAGGGTTAG 339 0.472 MATWKVAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILSGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAQLIKPVSLELGGKSPILVFEDVELDKG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88216g00001 112 Pfam Aldehyde dehydrogenase family 1 111 IPR015590 GO:0016491
Trme88216g00001 112 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 93 100 IPR029510 GO:0016491
Trme88216g00001 112 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 112 IPR016162 GO:0016491
Trme88216g00001 112 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 111 - -
Trme88216g00001 112 SUPERFAMILY ALDH-like 1 111 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme88216g00001 Trme-Chr88216 32 675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88216g00001 1 111 Aldehyde Dehydrogenase Gene Family AT1G74920 81.982 3.21e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88216g00001 K00130 - gmx:100170731 197.208