Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88114g00001 ATGTCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCTATTGAAAAAGTGAATGATGAGTATGTTAGATTGTGGTTTGAGTATTACAAGAAACAAGAAGATTTTACTAAGTTTCAAGATCTTCGTGAGATGTTAGGGAGTGATGAAAAAGGGCCATTTTATGGTAATCCTAATTTAGGTGTGGTTAGTTGGTTAACATTGCCAATTTATGGACTTGATTTTGGGTGGGGGAAAGAGGTTTATATGGGGCCAGGAACACATGATATGGATGGTGATTCTTTGCTTCTTCCTAGTCATGATGATGATGGATTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATATGGATGAGTTCAAGAGGCATTTTTATCAAGACATTGTGTGA 390 0.3718 MSKPLGYASSRIREAIEKVNDEYVRLWFEYYKKQEDFTKFQDLREMLGSDEKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDMDGDSLLLPSHDDDGLLVAICLQEVHMDEFKRHFYQDIV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88114g00001 129 Pfam Transferase family 2 126 - -
Trme88114g00001 129 Gene3D - 1 127 IPR023213 -
Trme88114g00001 129 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88114g00001 1 126 Monolignol Biosynthesis Gene Families AT5G48930 38.583 5.46e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88114g00001 K13065 - gmx:100777007 198.749