Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme88080g00001 ATGGCTGCAAAGCTTCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGATGTATGACAGGAATATTTCAACTGTTTGATCGTCATCAGATGCTCACGGCTCGCCGGATTAGTCAGAAGAGGCTTCCTTCTG 145 0.4414 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQMLTARRISQKRLPS 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme88080g00001 48 PANTHER LONGIFOLIA PROTEIN 1 46 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme88080g00001 Trme-Chr88080 588 732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme88080g00001 1 48 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 54.167 5.18e-10 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme88080g00001 - - gmx:100805643 94.7449