Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87883g00001 ATTTTTGTCGAAGGGTCTCAATGGATTCCGGGGTATTATAAGGCACTTGAAGCTATTGGAAAGCCTTCAACTTTTTATATTTGGGTTTTGGTTTCGGGCGTGTTTTATCATCTTTATAATCAATCATCTTACCAAGCATTGGATGAAATTAGTCCGTTAACTTTCTCCGTTGGAAACACAATGAAGAGAGTCGTGGTTATTGTGTCTTCGGTTTTGGTGTTCAGGAATCCGGTTCGGCCTCTTAATGGTCTTGGTTCTGCCATTGCTATTCTTGGGACTTTTCTTTATTCACAAGCTACGGCTGCAAAGAAAGCGAAGAAAATTGAAGGTGAAAAGAGTAGTTAG 345 0.3971 IFVEGSQWIPGYYKALEAIGKPSTFYIWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATAAKKAKKIEGEKSS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87883g00001 114 PANTHER SOLUTE CARRIER FAMILY 35 1 103 - -
Trme87883g00001 114 Pfam Triose-phosphate Transporter family 2 97 IPR004853 -
Trme87883g00001 114 SUPERFAMILY Multidrug resistance efflux transporter EmrE 22 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87883g00001 Trme-Chr87883 370 714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87883g00001 1 112 Antiporters AT5G17630 81.250 8.86e-63 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87883g00001 K15283 - gmx:100101869 199.134