Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87828g00001 CTGGAGATAAGGCAATCTGGTGAAGGAATGCATATTCCGGGGTTGGTCGAGGCACATGTGAACAACATGAATGAAGTGTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCGAACGAGCACAGTAGCCGATCTCACTGCATTCACTGTGTAATGGTTAAGGGAGAAAATCTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGCTTGTGGACTTAGCAGGCAGTGAAAGAGTTGCAAAGACAGAAGTTCAAGGTGATAGATTGAAGGAGACACAGAATATTAATAGATCTCTTTCGGCACTTGGTGATGTCATTTCAGCTCTTGCAACTAAAAGTTCTCACATCCCTTTCAGGTTATTATCCTTTTTATTTTTCAATCATAAATTTGGATCGGCTTATTTGAGCTTATCCCCTGACATAAGCACTTGTGAGACTGTCAGAGTGAACTTCTAG 474 0.4219 MEIRQSGEGMHIPGLVEAHVNNMNEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRLLSFLFFNHKFGSAYLSLSPDISTCETVRVNF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87828g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 125 IPR027417 -
Trme87828g00001 157 Pfam Kinesin motor domain 3 125 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme87828g00001 157 Gene3D Kinesin motor domain 1 131 IPR036961 -
Trme87828g00001 157 ProSiteProfiles Kinesin motor domain profile. 1 157 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme87828g00001 157 SMART kinesin_4 1 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme87828g00001 157 ProSitePatterns Kinesin motor domain signature. 72 83 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trme87828g00001 157 PRINTS Kinesin heavy chain signature 73 91 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme87828g00001 157 PRINTS Kinesin heavy chain signature 42 59 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme87828g00001 157 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 125 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87828g00001 Trme-Chr87828 223 696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87828g00001 1 152 Calmodulin-binding Proteins AT5G65930 41.290 2.99e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87828g00001 K10406 - gmx:100817247 236.498