Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87726g00001 ATGCCTGACAAGCGGGAAAAGATTGTAAGGCAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATAATGGTGAGGAAATTAAATTCTGGTTTGTGGTCTATAACAAAGTTTGTAAAGGAGCACACACATCCTCTGACACCTGGAAGAGGCAGACGGGACTTTGTTTACGAGCAATATCCG 183 0.4481 MPDKREKIVRQRAETRVGCRAMIMVRKLNSGLWSITKFVKEHTHPLTPGRGRRDFVYEQYP 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87726g00001 61 Pfam FAR1 DNA-binding domain 4 48 IPR004330 -
Trme87726g00001 61 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87726g00001 Trme-Chr87726 360 542 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme87726g00001 FAR1 2.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87726g00001 - - var:108338935 119.012