Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87676g00001 CTTGGTAGAGCTTTTACTGTTCCTCTTAAGAGTTATACTCATGAGATTGTTACTCTTTGGTATAGAGCTCCTGAGGTTTTACTTGGATCTACTACTTATTCTACTGGTGTTGATATCTGTATGAAATGTTGTCGAACGGCTATATCAAGGCATAGTTTGAACAAACTGTTATTTTCTGTGGTCCGCGATGGACAACAGTTATCACACACTGGGTGCCCTATGACATCACACGACTTAGATAATTTGAACCTGCTATGGGATTAA 264 0.3902 LGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTTYSTGVDICMKCCRTAISRHSLNKLLFSVVRDGQQLSHTGCPMTSHDLDNLNLLWD 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87676g00001 87 SUPERFAMILY Protein kinase-like (PK-like) 4 58 IPR011009 -
Trme87676g00001 87 Gene3D Transferase(Phosphotransferase) domain 1 5 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87676g00001 Trme-Chr87676 73 737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87676g00001 1 69 Core Cell Cycle Gene Families AT3G54180 64.286 6.50e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87676g00001 K07760 - pop:18100040 82.4185