Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87572g00001 GTGGTTGTTGTAGCACTCACAACTTGGCTGGGGTGGTTCATTCCGGGGAAAGCTGGATTTTACCCTAAACATTGGATACCAAAAGGAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCCATTTCTGTGTTGGTTGTTGCTTGTCCATGTGCTCTGGGTCTAGCTACACCAACTGCAGTCATGGTNGCTTCAGGCATAGGTGCTTCTCAAGGAGTGCTCATCAAGGGTGGAGATGCACTGGAGAAGGCACACAAGGATTGA 261 0.4828 VVVVALTTWLGWFIPGKAGFYPKHWIPKGMDAFELALQFAISVLVVACPCALGLATPTAVMVASGIGASQGVLIKGGDALEKAHKD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87572g00001 86 Gene3D - 1 84 - -
Trme87572g00001 86 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 85 - -
Trme87572g00001 86 Pfam E1-E2 ATPase 1 68 - -
Trme87572g00001 86 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 81 IPR023298 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87572g00001 1 85 Primary Pumps ATPases AT1G63440 70.588 2.76e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87572g00001 K17686 - gmx:100793894 166.392