Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87541g00001 ATGGCTGGATGTTTCTTTGCTGAAATGAGCTATGTAGATCCCCCAGTTTCTGATGTACTAAAGGGAATGTTTGTACCCAAACTTTCCGGTGAAGGAACCGTAGGCGATGCTATTGCCCTATTGGGCGCCCTTATCATGCCGCACAATCTTTTCCTCCATTCTGCACTGGTGCTATCTCGAAAAGTACCTAGTTCTGTGGGAGGCATAAATGTAAGGCACTCTGGAACTATACTCGATTTTGTGCCTAAGTGCACATTTAAATTCTATGTATGCATTGATAGACCTTAA 288 0.434 MAGCFFAEMSYVDPPVSDVLKGMFVPKLSGEGTVGDAIALLGALIMPHNLFLHSALVLSRKVPSSVGGINVRHSGTILDFVPKCTFKFYVCIDRP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87541g00001 95 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 69 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme87541g00001 95 Pfam Natural resistance-associated macrophage protein 1 63 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87541g00001 Trme-Chr87541 72 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87541g00001 1 69 Inorganic Solute Cotransporters AT1G15960 63.768 1.78e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87541g00001 K21398 - pvy:116131612 125.176