Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87334g00001 ATGGCCAAAAAATGTGAAGGACTTGCTGTGGGAATAGACCTTGGCACAACCTATTCATGTGTTGCAGTATGGCAGGAACAATACTGTCGCGCTGAGATCATTCACAATGATCAAGGCAACAGAACAACTCCTTCTTGTGTTGCTTTCAC 149 0.443 MAKKCEGLAVGIDLGTTYSCVAVWQEQYCRAEIIHNDQGNRTTPSCVAFT 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87334g00001 50 PRINTS 70kDa heat shock protein signature 8 21 - -
Trme87334g00001 50 PRINTS 70kDa heat shock protein signature 38 50 - -
Trme87334g00001 50 Pfam Hsp70 protein 9 50 IPR013126 GO:0005524|GO:0140662
Trme87334g00001 50 FunFam heat shock 70 kDa protein-like 3 50 - -
Trme87334g00001 50 SUPERFAMILY Actin-like ATPase domain 9 50 IPR043129 -
Trme87334g00001 50 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Trme87334g00001 50 PANTHER HEAT SHOCK PROTEIN 70KDA 9 49 IPR013126 GO:0005524|GO:0140662
Trme87334g00001 50 Gene3D - 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87334g00001 Trme-Chr87334 1 149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87334g00001 1 50 Calmodulin-binding Proteins AT1G56410 76.000 1.20e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87334g00001 K03283 - gmx:102667578 95.9005