Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87300g00001 ATGTCCATAGATCAAGTTAGAGCATATGTTCCTGATGTTTTGGCTCAATTCAAGAACACAATCAAGAATGTATATTCTCGCGGAGGAAGATCATTTTGGATTCACAATACTGGTCCTGTTGGTTGTTTGCCATACATCATTGAACTTCACAAAGTAACACCAGATAAAGTAGACAAAGCAGGATGTTCAACCCCTTATAATGAAGTGGCTAAGTTCTTCAATCATGAACTCAAACAAGCTGTTGTTCAACTCAGGAAAAAACTTCCCTTGGCTGCCATAACCTATGTTGATGTTTACTCAGCCAAGTACTCTCTCATTAGTCAAGCACACAAACATGGTAAATCTTAA 348 0.3793 MSIDQVRAYVPDVLAQFKNTIKNVYSRGGRSFWIHNTGPVGCLPYIIELHKVTPDKVDKAGCSTPYNEVAKFFNHELKQAVVQLRKKLPLAAITYVDVYSAKYSLISQAHKHGKS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87300g00001 115 Gene3D SGNH hydrolase 2 115 IPR036514 -
Trme87300g00001 115 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 2 113 - -
Trme87300g00001 115 Pfam GDSL-like Lipase/Acylhydrolase 3 104 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87300g00001 Trme-Chr87300 270 721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87300g00001 1 113 Pollen Coat Proteome AT1G75930 22.609 1.90e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87300g00001 - - gmx:100819985 193.741