Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87081g00001 ATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTTATGAACGTGACTGATGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGATTATTTACACTCAATTTTTAAAGTCCACAGAGACATTAAAGGCGGGAATATCTTATTAACCGAACAAGGAGATGTCAAGCTAG 193 0.399 MEYCGGGSVADLMNVTDEALDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87081g00001 64 Pfam Protein kinase domain 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme87081g00001 64 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Trme87081g00001 64 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 1 64 - -
Trme87081g00001 64 SUPERFAMILY Protein kinase-like (PK-like) 1 64 IPR011009 -
Trme87081g00001 64 ProSiteProfiles Protein kinase domain profile. 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87081g00001 1 64 MAP Kinase Kinase Kinase Kinase AT1G69220 90.625 2.01e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Trme87081g00001 Pkinase 1.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87081g00001 - - gmx:100804995 129.413