Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87077g00001 GATGCAGATGCAGAGGGGCTAAAAGCTGATGTTAAAAAATTCCTTTACGATCTTCGGATGCAGGCAGAAGTATTTGTCATAACAATGAAATGGGAAGAACAAGCGGATAGCGGGTCTCCGCAAGATGAGTCATTAGACGCATTTACTAGTGCCAATCAAAGAATTGTTGATTATTTAACCCAAATGAAGGCAAGAGCAGAGAGAGAAGGTACCCCTCTTATGGCAGATGGTAAGACCGTGGTTGTGAACGAGAAGCAAGTCGAGAAGTTTTTATACACAACGCTTAAGCTGAATTCCATAATTTTGAGATACTCGAGAATGGCTGCTGTTGTGTTAGTAAGTCTTCCTCCCCCTCCATTGTGCCACCCAGCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATATACCAAGGATTTTGATTGTAAGAGGATATCGTAGAGATGTTGTAACTCTATTCACATAG 471 0.4119 DADAEGLKADVKKFLYDLRMQAEVFVITMKWEEQADSGSPQDESLDAFTSANQRIVDYLTQMKARAEREGTPLMADGKTVVVNEKQVEKFLYTTLKLNSIILRYSRMAAVVLVSLPPPPLCHPAYFYMEYMDLLLENIPRILIVRGYRRDVVTLFT 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87077g00001 156 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 8 154 IPR004842 GO:0006811|GO:0015377|GO:0016020
Trme87077g00001 156 Pfam Solute carrier family 12 39 155 IPR018491 GO:0006811|GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87077g00001 Trme-Chr87077 1 471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87077g00001 1 156 Inorganic Solute Cotransporters AT1G30450 71.338 5.76e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87077g00001 K14427 - vum:124833249 260.381