Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87074g00001 ATGTTAGAGAATCTAAAAATTCTTAATCTTGGTCATTCTCTGGATTTGACTGAAACTCCAGACTTTTCATACATGCCTAATCTTGAAAAGCTAGTGCTCAAAGGTTGTATAAGTTTGTCTGCGGTCTCCCATAGTGTCGGATCTCTATATAAACTTCTGATAAATTTGACAGACTGCAAAGGTCTTCGGAAACTTCCGAGAAGCATCTATAAACTAAAATCTCTAGAAACTTTGATTCTTTCGGGATGTTCCATGATTGACAAATTGGAGGAGGACTTGGAACAGATGGAATCATTGAGAACCTTGATTGCAGATAAGACTGCTATAACAAAAGTGCCATTTTCAACT 348 0.3678 MLENLKILNLGHSLDLTETPDFSYMPNLEKLVLKGCISLSAVSHSVGSLYKLLINLTDCKGLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLRTLIADKTAITKVPFST 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87074g00001 116 Coils Coil 86 106 - -
Trme87074g00001 116 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Trme87074g00001 116 SUPERFAMILY L domain-like 2 114 - -
Trme87074g00001 116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87074g00001 Trme-Chr87074 335 682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87074g00001 2 115 WRKY Transcription Factor Family AT4G12020 36.522 3.54e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87074g00001 - - mtr:11411578 198.749