Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme87020g00001 ATGAAAGCCGAGTATTTCCCACCAAAGGAAGATGTGATACTGCAAAATGAATCTCCTACAGACCTTTATGTGCTGGTTTCAGGAGCAGTGAATCTCGTTCACTACATTGATGGGAATGATCAAGTGGTTCTTGACAAGGCAACTGCAGTAGATACATTTGGAGAATTTGGAGTTTTATATCATGTACCGCAGCCTTTCACTGTTCGAACCACAGAGCTTTCTCAGATATTAAGACTCAACAGTACATCCTTAATGAATGTTTTACAAGCAAATCCAGGAGATGCACAGATTGTAATGGATAACCTTTTAATG 312 0.3942 MKAEYFPPKEDVILQNESPTDLYVLVSGAVNLVHYIDGNDQVVLDKATAVDTFGEFGVLYHVPQPFTVRTTELSQILRLNSTSLMNVLQANPGDAQIVMDNLLM 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme87020g00001 104 ProSiteProfiles cAMP/cGMP binding motif profile. 1 104 IPR000595 -
Trme87020g00001 104 SUPERFAMILY cAMP-binding domain-like 1 102 IPR018490 -
Trme87020g00001 104 PANTHER POTASSIUM CHANNEL AKT1 1 103 IPR045319 GO:0005249|GO:0006813
Trme87020g00001 104 SMART cnmp_10 1 103 IPR000595 -
Trme87020g00001 104 Pfam Cyclic nucleotide-binding domain 5 90 IPR000595 -
Trme87020g00001 104 FunFam Potassium channel KAT2 1 104 - -
Trme87020g00001 104 CDD CAP_ED 1 99 IPR000595 -
Trme87020g00001 104 Gene3D Jelly Rolls 1 104 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme87020g00001 Trme-Chr87020 75 583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme87020g00001 1 104 Ion Channels AT5G46240 63.462 5.27e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme87020g00001 K21867 - gmx:100783528 169.088