Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme869653g00001 ATGAGAAAAACAACCACCAAGAAGACGGTTCCTTCTGGAAGCCCGTGGTACGGTCCAGACCGTGTCAAGTATTTGGGTCCATTCTCTGGTGAAGCACCATCCTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGATACTGCTGGGCTCTCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAACTCGAG 195 0.5179 MRKTTTKKTVPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme869653g00001 65 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 65 IPR001344 GO:0009765|GO:0016020
Trme869653g00001 65 SUPERFAMILY Chlorophyll a-b binding protein 15 65 - -
Trme869653g00001 65 Pfam Chlorophyll A-B binding protein 32 65 IPR022796 -
Trme869653g00001 65 Gene3D Chlorophyll a/b binding protein domain 23 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme869653g00001 Trme-Chr869653 22 216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme869653g00001 1 65 Chloroplast and Mitochondria Gene Families AT1G29930 87.692 1.26e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme869653g00001 K08912 - han:110923257 135.961