Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86937g00001 ATGGTTGAGGGAGCAGTTTTGGTTGTTGATGCTGGGGAAGGTCCACTTGCCCAAACTAAGTTTGTTCTTGCGAAAGCCTTAAAGTATGGGTTGCGGCCTATTCTTCTTTTAAACAAAGTAGATCGGCCATCAG 133 0.4511 MVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPS 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86937g00001 44 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 43 IPR027417 -
Trme86937g00001 44 Gene3D - 1 44 IPR027417 -
Trme86937g00001 44 Pfam Elongation factor Tu GTP binding domain 2 43 IPR000795 GO:0003924|GO:0005525
Trme86937g00001 44 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86937g00001 Trme-Chr86937 417 549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86937g00001 1 42 Eukaryotic Initiation Factors Gene Family AT1G56070 47.619 6.65e-07 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86937g00001 K06207 - dct:110091937 87.4261