Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86928g00001 GTACATAGACATCTTTGCAAGGAAGTTGTCTCCCTCCGTGTTATAGAGAAATACTTAGACTGTACGCAGATTCAGATCTATAAAAGGCACAAGCAACCGGTTATTTCTCTGAATCCTCTCCAACTCGATGAGTTAGCATTAGATGCGGCAGAATCATGCCAAGTTTGCAACAGAAGGTTGAATATACCTGATTTATATCGCTACTGCTCGATTTCTTGCAAGGTCGAATCAGTTTCGAAAAAGTCCGAGCTTGAGAATCCAGTTAGCACAATACCAGTTGAATCTTCCTCAGTACCTTCCATCCAGAGTCCTCCTCGTCGTCCTCAGGGAACACTAAAGGGCGTCTCTGAATTCTCTTTCCGAAAAAGGAAAAGGAAGGGAATTCCCCAGAGAGCTCCGTTATTCTGA 408 0.4363 VHRHLCKEVVSLRVIEKYLDCTQIQIYKRHKQPVISLNPLQLDELALDAAESCQVCNRRLNIPDLYRYCSISCKVESVSKKSELENPVSTIPVESSSVPSIQSPPRRPQGTLKGVSEFSFRKRKRKGIPQRAPLF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86928g00001 135 MobiDBLite consensus disorder prediction 91 109 - -
Trme86928g00001 135 MobiDBLite consensus disorder prediction 91 135 - -
Trme86928g00001 135 Pfam PLATZ transcription factor 3 75 IPR006734 -
Trme86928g00001 135 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 134 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trme86928g00001 PLATZ 7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86928g00001 - - tpra:123915973 220.705