Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme868608g00001 GACTTTGGACTCATATCTATTCCAGAAGTTTCTTATCGCCACCTCACTGACAATGATCAATTTATTGTCTTAGCTACAGACGGAATTTGGGATGTTATGTCCAACGAACAAGTTGTGAACATTGTCGCATCTGCTCCGCGATCTTCTGCTGCTAAACTACTTGTGGAGTCAGCTGTTCAAGCATGG 186 0.4301 DFGLISIPEVSYRHLTDNDQFIVLATDGIWDVMSNEQVVNIVASAPRSSAAKLLVESAVQAW 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme868608g00001 62 SUPERFAMILY PP2C-like 2 60 IPR036457 -
Trme868608g00001 62 PANTHER PROTEIN PHOSPHATASE 4 60 IPR015655 GO:0004722|GO:0006470
Trme868608g00001 62 Gene3D - 1 62 IPR036457 -
Trme868608g00001 62 ProSiteProfiles PPM-type phosphatase domain profile. 1 62 IPR001932 -
Trme868608g00001 62 Pfam Protein phosphatase 2C 5 48 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme868608g00001 Trme-Chr868608 1 186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme868608g00001 1 62 PP2C-type Phosphatase Gene Family AT1G79630 61.905 5.75e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme868608g00001 - - tpra:123883030 115.931