Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8684g00001 ATGAAGCACGTAACTCGGGAGTGTCGTATTCACAAGAGCTTGGTTCATGGTCACATTGTTTGTCTATGGGAGGTCTTTGGGATTGATCAAAATACAGCGTGCACTGTTCAAGAGTATTGTATTGGGAAAGATCTTGATGCTGTTCTTAAANNNNNNNNNNTNNNNNNNNNNAGCGAGGCTAGAGTCATTTTGGTTCAGATTTTCCAAGCCCTCGTTTACTTGAATAGAAGAACACAGAAGATCATCCATTATGATTTGAAGCCCGGAAATGTTTTGTTTAATGAGCTTGGAGTTGCAAAAGTAACCGATTTTGGTCTTAGCAAGATAGTAGAGAATGATGTGGGATCCGAGGGCATGGAGCTTACATCCCAGGGGGCTGGAACATACTGGTATTTGCCTCCTGAATGTTTTGACTTTAGTAAAACACCTCTTATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTTGGCAAACGTCCTTTTGGACATGGCCAAACACAAGAGAGCATACTTCGTGAAGAAACAATTATTGGGGCACACATGGTTGAATTTCCCCCAGTGCCTACTGTTTCTGACAAGGCAAAG 606 0.4043 MKHVTRECRIHKSLVHGHIVCLWEVFGIDQNTACTVQEYCIGKDLDAVLKXXXXXXXSEARVILVQIFQALVYLNRRTQKIIHYDLKPGNVLFNELGVAKVTDFGLSKIVENDVGSEGMELTSQGAGTYWYLPPECFDFSKTPLISSKVDVWSAGILFYQMLFGKRPFGHGQTQESILREETIIGAHMVEFPPVPTVSDKAK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8684g00001 202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Trme8684g00001 202 SUPERFAMILY Protein kinase-like (PK-like) 2 179 IPR011009 -
Trme8684g00001 202 Gene3D Transferase(Phosphotransferase) domain 1 1 202 - -
Trme8684g00001 202 SMART serkin_6 2 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8684g00001 202 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8684g00001 202 Pfam Protein kinase domain 2 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme8684g00001 202 PANTHER MIXED LINEAGE PROTEIN KINASE 5 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8684g00001 Trme-Chr8684 308 1546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8684g00001 2 194 MAP Kinase Kinase Gene Family AT4G29810 30.570 1.16e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Trme8684g00001 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8684g00001 K08864 - mof:131149647 326.25