Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86785g00001 GAACCAAGTGAGAAAGATGTAGCACTCAAAATATTATATTGTGGAATATGTCACTCCGATCTTCATAAGATGAAGAATGAATGGGGCACTATCAACTATCCATTTGTTCCCGGACATGAAATTGTTGGCATAGTGACTGAGGTGGGAAATAAAGTGAGAAAGTTCAAAGTTGGTGACAAAGTAGGTGTGGGATGCCTGGTTGATTCTTGTCACTCATGCCAAAATTGTGCTAATAATCTTGAGAATTATTGTCCCACATTTACACTCACTGATGGTTCCAAATATAGTGATGGAACCGCCACGTATGGCGGTTACTCTGATTCAATGGTTTCGGACGAGCACTTTGTGTTTCACATTCCAGATGAGTTACCTCTTGATGCCGCCGCACCTCTGCTTTGCGCTGGTATCACAGTATATAGTCCTCTTCGATATTTTGGACTCGACAAGCCTGGTTTGCATGTTGGTGTTGTTGGTCTTGGCGGACTTGGCCATATGGCTGTGAAATTTGCCAAAGC 515 0.4291 EPSEKDVALKILYCGICHSDLHKMKNEWGTINYPFVPGHEIVGIVTEVGNKVRKFKVGDKVGVGCLVDSCHSCQNCANNLENYCPTFTLTDGSKYSDGTATYGGYSDSMVSDEHFVFHIPDELPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKA 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86785g00001 172 FunFam Uncharacterized protein 1 133 - -
Trme86785g00001 172 Pfam Alcohol dehydrogenase GroES-like domain 5 118 IPR013154 -
Trme86785g00001 172 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 38 52 IPR002328 GO:0008270|GO:0016491
Trme86785g00001 172 Gene3D - 1 138 - -
Trme86785g00001 172 SUPERFAMILY GroES-like 1 151 IPR011032 -
Trme86785g00001 172 Gene3D - 139 172 - -
Trme86785g00001 172 PANTHER ALDEHYDE REDUCTASE 3 172 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86785g00001 Trme-Chr86785 127 743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86785g00001 1 172 Monolignol Biosynthesis Gene Families AT4G37990 71.512 9.47e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86785g00001 K23232 - gmx:100816901 285.419