Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86782g00001 AAGGGTCATTCTTCTCGTGTTTCTCTTTTGTCTCAACAAGACAAGAAAGGGAGTCCCTACCGATCTCCTCCTCGGGATGATGATGTTGCCCCTACACAGGAATTGTACACAAACATGGCGAATGTTGGAATGAACTCCCACCAAACTGATTGCCAAACTGGTGGGTCAGAAAATCCCTATGCTTCACCCAGTGGACAAATTTTGCAAAACAATGCAACGCATAACGAGAGGAAACGGAAGGGTGATGATGGCAAAATTACAAGGGATGTTGAAGCCAATGAGATGAGAATCCAGAAAGAGCTCGAAAAACAAGATAACCTTAGAAAAAAGAATGAGGAGCGGATAAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGAAAGGAAGAAGAGAGATTGATGCGTGAGAGACAGCGTGAAGAGGAAAGAACAAAACGAGAGGAAAAACGTGAAATTGAACGAAGGGAAAAGTATTTGCTGAGAGAAAATTTAAAA 495 0.4202 KGHSSRVSLLSQQDKKGSPYRSPPRDDDVAPTQELYTNMANVGMNSHQTDCQTGGSENPYASPSGQILQNNATHNERKRKGDDGKITRDVEANEMRIQKELEKQDNLRKKNEERIRKEMERQDRERRKEEERLMRERQREEERTKREEKREIERREKYLLRENLK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86782g00001 165 MobiDBLite consensus disorder prediction 1 165 - -
Trme86782g00001 165 MobiDBLite consensus disorder prediction 1 18 - -
Trme86782g00001 165 MobiDBLite consensus disorder prediction 34 72 - -
Trme86782g00001 165 MobiDBLite consensus disorder prediction 73 165 - -
Trme86782g00001 165 Coils Coil 90 155 - -
Trme86782g00001 165 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 2 164 IPR044977 GO:0006357
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86782g00001 70 165 Homeobox Transcription Factor Family AT5G44180 62.500 3.13e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86782g00001 - - gmx:100784945 159.073