Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme866367g00001 ATGACCATGGTGAATTTGTACCTGATAACATTCCTTGCTGTTGTAGAGCTTCATAAGAAGGAGACATGTGAAGCTGTCACTATCATTGAAACTCCTCCAGTTGTTGTTGTTGGAGTGGTGGGATATGTGAAGACACCACGAGGCCTTCGC 150 0.4467 MTMVNLYLITFLAVVELHKKETCEAVTIIETPPVVVVGVVGYVKTPRGLR 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme866367g00001 50 Gene3D - 33 50 - -
Trme866367g00001 50 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 17 50 IPR045077 GO:0003735|GO:0005840|GO:0006412
Trme866367g00001 50 Gene3D Translation factors 16 32 - -
Trme866367g00001 50 Pfam Ribosomal protein L3 14 50 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme866367g00001 Trme-Chr866367 1 150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme866367g00001 16 50 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 94.286 7.25e-11 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme866367g00001 K02925 - ghi:107952309 49.2914