Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86587g00001 GGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGATTTGAGGATAAAACACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAGATTGCCATTCTCGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAACTGGCGGTGAAGTAATCCTTGGGGAGCATAATGTATTGCCTAACTATTTTGAGCAGAATCAGGCTGAGGCGCTTGATCTGGAAAAGACAGTGCTTCAGACAGTAGAGGAAGCTGCAGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGCATTCAAATTCTTGCTTATTTGA 474 0.4072 GEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKTLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPTGGEVILGEHNVLPNYFEQNQAEALDLEKTVLQTVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGAFKFLLI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86587g00001 157 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 4 152 - -
Trme86587g00001 157 Pfam ABC transporter 45 151 IPR003439 GO:0005524
Trme86587g00001 157 Gene3D - 2 156 IPR027417 -
Trme86587g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86587g00001 Trme-Chr86587 3 729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86587g00001 26 87 Calmodulin-binding Proteins AT2G36910 32.308 2.40e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86587g00001 - - gmx:100797121 270.011