Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8639g00001 ATGGCAACACAACCTGAATTTGAACATCCTAACAAGGCCATTGGTTTCGCAGCTAGAGACCCTTCTGGTCTTCTTTCCCCTTTCAATTTCTCTAGAAGGAAAACCGGTGAAAAAGACGTGGCATTTAAAGTATTGTATTGTGGAATATGTCACTCTGATCTCCACATGGTGAAAAATGAATGGGGCGTGTCCACCTATCCGCTAGTTCCTGGGCATGAGATTGCTGGTATAGTGACAGAGGTGGGAAGCAAAGTAGAAAATTTCAAAGTTGGAGACAGAGTGGGTGTAGGCTGCATGGTTGATTCGTGTCGCACGTGCCAAAATTGCGAAGACAATCTTGAGAATTATTGCTCTAAATATACACTCACCTATAGTGCAAAGTATAGTGATGGCACAATCACATATGGCGGCTACTCTGATTCAATGGTTGCGGACGAGCATTTTGTGGTTCACATTCCTGATGGCTTACCACTTGAAGCTGCTGCTCCTCTTCTTTGTGCCGGTATCACAGTGTATAGTCCTCTTAAATATTTTGGACTCAACAAGCCCGGGCTTCATATAGGTGTTGTTGGACTTGGCGGACTTGGTCATATGGCTGTGAAATTCGCCAAAGCTTTTGGTGCTAATGTCACAGTA 636 0.4418 MATQPEFEHPNKAIGFAARDPSGLLSPFNFSRRKTGEKDVAFKVLYCGICHSDLHMVKNEWGVSTYPLVPGHEIAGIVTEVGSKVENFKVGDRVGVGCMVDSCRTCQNCEDNLENYCSKYTLTYSAKYSDGTITYGGYSDSMVADEHFVVHIPDGLPLEAAAPLLCAGITVYSPLKYFGLNKPGLHIGVVGLGGLGHMAVKFAKAFGANVTV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8639g00001 212 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Trme8639g00001 212 Gene3D - 2 173 - -
Trme8639g00001 212 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 212 IPR036291 -
Trme8639g00001 212 PANTHER ALDEHYDE REDUCTASE 5 212 IPR047109 GO:0016616
Trme8639g00001 212 SUPERFAMILY GroES-like 19 184 IPR011032 -
Trme8639g00001 212 CDD CAD1 15 212 IPR047109 GO:0016616
Trme8639g00001 212 FunFam Uncharacterized protein 16 166 - -
Trme8639g00001 212 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Trme8639g00001 212 Gene3D - 174 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8639g00001 Trme-Chr8639 413 1807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8639g00001 11 212 Monolignol Biosynthesis Gene Families AT4G37990 71.782 9.22e-98 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8639g00001 K23232 - gmx:100816901 355.91