Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86390g00001 TTGGATAAGACTAGATTCCACATTATTGGTGCAATACTCTTCACAGCTCAATCAGCATTACTTCATCCAACAGCAGTGGTGAAGACAAGAATGCAAGTAGCTAGTTCAGGACTCTCCAACATGAAGGGAACCTCGGTGTTCACTCATATTTTGAGGAGTGATGGAATTCCTGGAATTTTTAGAGGTTTTGGAACTTCTGCTATTGGATCAATGCCTGGTAGAGTTTTAGCTCTCACATCTCTTGAGATGTCAAAGGATTTTATGTTGAAACACACTCAAGGTAGTGATATTCCAGAAGCATCGCGGATTGGCCTTGCAAATGGTGTTGCTGGCATGGTTTCAAATTTGGTATCTTGTGTTTACTTTGTGCCTTTAGATGTGGTAAGTAATCTTTTTAGATGCTTTCGATTTGCTTTACCATTTAAAATATTAAAACGATATTAG 444 0.3851 MDKTRFHIIGAILFTAQSALLHPTAVVKTRMQVASSGLSNMKGTSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIPEASRIGLANGVAGMVSNLVSCVYFVPLDVVSNLFRCFRFALPFKILKRY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86390g00001 147 Pfam Mitochondrial carrier protein 8 91 IPR018108 -
Trme86390g00001 147 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 130 - -
Trme86390g00001 147 Gene3D Mitochondrial carrier domain 4 136 IPR023395 -
Trme86390g00001 147 SUPERFAMILY Mitochondrial carrier 8 131 IPR023395 -
Trme86390g00001 147 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 87 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86390g00001 Trme-Chr86390 290 733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86390g00001 1 130 Chloroplast and Mitochondria Gene Families AT5G15640 45.385 5.70e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86390g00001 K15121 - qsa:O6P43_003724 222.246