Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86372g00001 AATGCACTTGCTTGGTTATATTTGGCTTGTGCATCTTTTGTTATTTGTTTCCTTGAGGGTTATTGTTGGACAAGGACAAGTGGGAGACAAGCTTCAAGAATGAGATGCAAGTATCTTAAAGCAGTTCTTAGACAAGAAGTTTCTTACTTTGATTTGCAGGTCACAAGTACCTCAGAGATCATCACTAGTGTCTCTAATGACACTCTTATAATTCAAGATGTTCTTAGTGAAAAGTCGTCTCACTACAAGAAAATTGCGTTATAG 264 0.3674 NALAWLYLACASFVICFLEGYCWTRTSGRQASRMRCKYLKAVLRQEVSYFDLQVTSTSEIITSVSNDTLIIQDVLSEKSSHYKKIAL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86372g00001 87 Pfam ABC transporter transmembrane region 2 79 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme86372g00001 87 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 77 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme86372g00001 87 PANTHER ABC TRANSPORTER B FAMILY 2 81 IPR039421 -
Trme86372g00001 87 SUPERFAMILY ABC transporter transmembrane region 2 76 IPR036640 GO:0005524|GO:0016020
Trme86372g00001 87 Gene3D ABC transporter type 1, transmembrane domain 1 82 IPR036640 GO:0005524|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86372g00001 2 82 Calmodulin-binding Proteins AT2G36910 34.568 4.19e-13 61.2