Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86319g00001 ATGGATTTACCTTTCATATTGCTCAANGATTCTTTGAACAAGTTCGGTTCTAGGTTTTTGAACTATGACGATCTAATCGGAGATTCGTACAATAGCTCCGACGAGATTCCGGCGAACAGTGTTGTTTCGCAATCCGACGTGGCGGTAATTCTGTACTCTTCAGGTACCACGGGGAGAAGTAAGGGAGTGATGTTGACTCATCGGAACTTCATAGCGACGGCTGTGGCGGGAGTGGCGGATCAAGACCGTTACGGCGAGGGGAAGAACGTGTTCCTGTGTTTTGTGCCGATGTATCACGTGATGGGATTGGCGGTTATAACGTACACACAGTTGAGGAGAGGGAACACGGTGGTGTCGATGGGGAGATTTGATCTGGAGAAGACTTTAGCGGCGGTGGAGAAGTTTAGGGTGACGTATTTGTATGTTGCTCCGCCGGTGATGGTGGAGCTGATCAAGCGGCGTGACATTTTGAGCGGTTATGACTTGTCGTCGCTGAAGCAACTTGCCGGCGGTGCTGCTCCGTT 524 0.5038 MDLPFILLXDSLNKFGSRFLNYDDLIGDSYNSSDEIPANSVVSQSDVAVILYSSGTTGRSKGVMLTHRNFIATAVAGVADQDRYGEGKNVFLCFVPMYHVMGLAVITYTQLRRGNTVVSMGRFDLEKTLAAVEKFRVTYLYVAPPVMVELIKRRDILSGYDLSSLKQLAGGAAP 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86319g00001 174 SUPERFAMILY Acetyl-CoA synthetase-like 15 174 - -
Trme86319g00001 174 Gene3D - 3 174 IPR042099 -
Trme86319g00001 174 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 174 - -
Trme86319g00001 174 ProSitePatterns Putative AMP-binding domain signature. 50 61 IPR020845 -
Trme86319g00001 174 Pfam AMP-binding enzyme 36 173 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86319g00001 Trme-Chr86319 1 524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86319g00001 2 174 Monolignol Biosynthesis Gene Families AT4G05160 52.809 4.87e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86319g00001 K01904 - mtr:25483961 263.462