Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86228g00001 GGTATTACTGTCAGGTTTGTTGTGAAAATACCAGAGGGATTGGCACCAGAGCAAGCTGCACCATTGTTATGTGCAGGTGTGACAGTGTACAGTCCACTTGCACATTTTGGGCTGAAACAAAGTGGGCTTAGAGGTGGAATTTTGGGCCTTGGTGGNGTAGGACACATGGGGGTGAAAGTAGCAAAGGCATTAGGTCACCATGTCACTGTGATAAGTTCTTCTGATAAGAAGAAGAAAGAAGCACTTGAGGATCTTGGAGCTGACAATTATCTTGTTAGCTCAGATACTGTTGGGATGCAAGAAGCTGCTGATTCACTTGATTATATCATTGATACTGTTCCTGTTGGTCACCCTCTTGAGCCTTATCTTGCATTGCTCAAACTTGATGGAAAATTGATCTTGATGGGTGTTATTAACACCCCTCTTCAATTTGTTACCCCTATGGTCATGCTTGGTAAGTAA 462 0.4307 GITVRFVVKIPEGLAPEQAAPLLCAGVTVYSPLAHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLALLKLDGKLILMGVINTPLQFVTPMVMLGK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86228g00001 153 FunFam Cinnamyl alcohol dehydrogenase 25 153 - -
Trme86228g00001 153 PANTHER ALDEHYDE REDUCTASE 5 150 IPR047109 GO:0016616
Trme86228g00001 153 Pfam Zinc-binding dehydrogenase 52 150 IPR013149 -
Trme86228g00001 153 Gene3D - 25 153 - -
Trme86228g00001 153 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 150 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86228g00001 Trme-Chr86228 2 463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86228g00001 2 153 Monolignol Biosynthesis Gene Families AT3G19450 81.579 3.01e-75 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86228g00001 K00083 - gmx:100804892 250.751