Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8621g00001 CCTGATATAACTGCACCTGGTGTCAACATTATTGCTGCCTACTCGGGAGGGATTAGCCCTTCAGAGATGGACTTTGATAAGCGCAGGATTCCCTTCATCACAATGTCTGGAACATCCATGTCATGTCCTCATGTGACTGGAATTGTTGGCCTTCTCAAGACTCTCCACTCTGACTGGAGTCCATCAGCTATTAAATCAGCAATTATGACAACCGGTAACAAACTAACAAATTTAGTATACTCGTGA 246 0.439 PDITAPGVNIIAAYSGGISPSEMDFDKRRIPFITMSGTSMSCPHVTGIVGLLKTLHSDWSPSAIKSAIMTTGNKLTNLVYS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8621g00001 81 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 76 IPR045051 -
Trme8621g00001 81 ProSiteProfiles Serine proteases, subtilase domain profile. 1 81 - -
Trme8621g00001 81 SUPERFAMILY Subtilisin-like 2 75 IPR036852 GO:0004252|GO:0006508
Trme8621g00001 81 Pfam Subtilase family 1 74 IPR000209 GO:0006508|GO:0008236
Trme8621g00001 81 ProSitePatterns Serine proteases, subtilase family, serine active site. 37 47 IPR023828 -
Trme8621g00001 81 Gene3D Peptidase S8/S53 domain 1 76 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8621g00001 Trme-Chr8621 98 343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8621g00001 1 77 Subtilisin-like Serine Gene Family AT5G59810 66.234 8.20e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8621g00001 - - qlo:115992195 130.183