Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86197g00001 ATGAGTTCTCTCAGTTTCCTCACTTTTCTTGTTAACCTGTTTCTTTTGCAGCTCATAGCAAGTTCTTATGCAGCAAAACTTAGAGTTGACTATTACAGAAAAACATGTCCAAATGTTGAATCAATAGTCCACAATGCAGTTGAGATGAAACTTCAGCAAACATTTGTAACAGCACCTTCTWCWCTTAGGCTCTTTTTCCATGATTGTTTTGTTCAGGGATGTGATGCTTCTGTGATGTTAGCTTCAAGAAATAGCACTTCAGAGAAAGATAATGCTATCAATCTATCACTAGCTGGTGATGGCTTTGACACAGTGATCAAAGCAAAAGCTGCAGTTGACAGTGTTCCT 348 0.3793 MSSLSFLTFLVNLFLLQLIASSYAAKLRVDYYRKTCPNVESIVHNAVEMKLQQTFVTAPSXLRLFFHDCFVQGCDASVMLASRNSTSEKDNAINLSLAGDGFDTVIKAKAAVDSVP 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86197g00001 116 ProSiteProfiles Plant heme peroxidase family profile. 26 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 Gene3D - 27 116 - -
Trme86197g00001 116 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 Pfam Peroxidase 50 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trme86197g00001 116 PANTHER - 9 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme86197g00001 116 SUPERFAMILY Heme-dependent peroxidases 27 114 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86197g00001 Trme-Chr86197 1 436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86197g00001 24 116 Peroxidase AT4G37530 70.213 3.34e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86197g00001 K00430 - gmx:100793327 172.17