Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme86111g00001 ATGTCAAGAAATTGGGGACAAAATTGGCAAAGCAATTCTTATCTCAATGGACAAAGCCTCTCTTTTAAAGTCACCACCGGTGACGGTAGAACGGTGACAAGCTACAATGTGGCACCGGCTGATTGGCAATTTGGTCGGACCTTTCAAGGGG 151 0.4636 MSRNWGQNWQSNSYLNGQSLSFKVTTGDGRTVTSYNVAPADWQFGRTFQG 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme86111g00001 50 Pfam Expansin C-terminal domain 1 39 IPR007117 -
Trme86111g00001 50 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 1 50 IPR007117 -
Trme86111g00001 50 SUPERFAMILY PHL pollen allergen 1 50 IPR036749 -
Trme86111g00001 50 Gene3D - 1 50 IPR036749 -
Trme86111g00001 50 PRINTS Expansin signature 7 28 IPR002963 GO:0009664
Trme86111g00001 50 PRINTS Expansin signature 36 50 IPR002963 GO:0009664
Trme86111g00001 50 PANTHER EXPANSIN-A15 1 50 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme86111g00001 Trme-Chr86111 63 213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme86111g00001 1 50 Expansin Gene Family AT1G26770 80.000 6.18e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme86111g00001 - K20628 nnu:104594501 103.219