Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8603g00001 ATGTTTACTTTGTGGTATGAGACTATGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTACAATTCACCTGTGCCTTCTGGTCACACTCCTCACCCATATATGTGGGGGCCACCACAGCCTATGATGCCGCCTTATGGACATCCTTATGCAGCAATGTATCCTCATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATCCACATAGTCAGGGAGTTTCATCTTCACCTGTTACTGGAACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGGAAATACCGATCAGGGTCTGATGAAGAAATTGAAAGGGTTCGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAGAGTGCCGAGCCTGGAGCTGAAAGCAAGCTATCACAGAGCGTGGATACTGACGGTTCAAGTGATGGAAGTGACAGCAACACTTCAGGGGTAAGGACTTGCTTGCAATGCAATTCTTATTCTGAACTTTGTTGA 501 0.4691 MFTLWYETMAYYGPRVAMPPYYNSPVPSGHTPHPYMWGPPQPMMPPYGHPYAAMYPHGGVYTHPAVPIGPHPHSQGVSSSPVTGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESKLSQSVDTDGSSDGSDSNTSGVRTCLQCNSYSELC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8603g00001 166 MobiDBLite consensus disorder prediction 67 104 - -
Trme8603g00001 166 PANTHER G-BOX-BINDING FACTOR 3-RELATED 5 151 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trme8603g00001 166 MobiDBLite consensus disorder prediction 73 102 - -
Trme8603g00001 166 MobiDBLite consensus disorder prediction 129 154 - -
Trme8603g00001 166 Pfam Disordered region downstream of MFMR 100 153 - -
Trme8603g00001 166 Pfam G-box binding protein MFMR 5 67 IPR012900 -
Trme8603g00001 166 MobiDBLite consensus disorder prediction 117 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8603g00001 Trme-Chr8603 225 1591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8603g00001 5 153 bZIP Transcription Factor Family AT2G46270 62.987 3.47e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8603g00001 K09060 K01792 gmx:100781875 256.144