Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme857632g00001 GATGTCACTCCCCTTTCACTTGGTGTGGAAACTGTTGGTGGTGTCATGACTGTCCTGATTCGAAAGAACCATACCATTCCGGCCAAGAAGGAGCGGATTTTCTCAACCTACTCAGATAACCAGACTGGTGTGACCATAAAGGTGTACGAGGGTGAGAGAAGTAGGAGCATGGACAACAACTTGCTAGGTAAATTCGAGCTTTCTGGCATCCTTCCTGCTCCAAGGGGTGTTCC 233 0.4893 DVTPLSLGVETVGGVMTVLIRKNHTIPAKKERIFSTYSDNQTGVTIKVYEGERSRSMDNNLLGKFELSGILPAPRGVP 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme857632g00001 78 PANTHER HEAT SHOCK PROTEIN 70KDA 1 78 IPR013126 GO:0005524|GO:0140662
Trme857632g00001 78 Pfam Hsp70 protein 1 78 IPR013126 GO:0005524|GO:0140662
Trme857632g00001 78 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 78 IPR029047 -
Trme857632g00001 78 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 78 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme857632g00001 Trme-Chr857632 3 235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme857632g00001 1 78 Calmodulin-binding Proteins AT3G09440 80.769 3.59e-39 134