Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85753g00001 GGTGTTGTAAATGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAATCGCAAGTCCACAGGTAAGGAAGATTACATTTACTGGCTCGACGGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACGGTTAAAAAAGTATGA 150 0.4267 GVVNVVMGNAPDIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKV 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85753g00001 49 Pfam Aldehyde dehydrogenase family 1 49 IPR015590 GO:0016491
Trme85753g00001 49 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 49 IPR016162 GO:0016491
Trme85753g00001 49 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 1 49 - -
Trme85753g00001 49 SUPERFAMILY ALDH-like 1 49 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme85753g00001 Trme-Chr85753 350 589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85753g00001 1 49 Aldehyde Dehydrogenase Gene Family AT1G79440 83.673 7.16e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85753g00001 K17761 - gmx:100808318 95.5153