Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8569g00001 GTCAGTGATTATCGGCAATCTCTTCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATACAACTGGAGGCCATAAGAGGTGGTAGAACAATAAAAATATCGATATTTGAAATTGTTGTTGGTGATGTACTGCCCCTTAAAATAGGAGATCAGGTTCCTGCTGACGGAGTTTTAATTACTGGTCACTCACTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCAAAAAGCACCATTTTTAATGTCAGGTTGCAAAGTAGCAGATGGAGTTGGTTCTATGCTGGTATAA 309 0.3819 VSDYRQSLQFQNLNAEKQNIQLEAIRGGRTIKISIFEIVVGDVLPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDQKAPFLMSGCKVADGVGSMLV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8569g00001 102 PANTHER CATION TRANSPORTING ATPASE 1 102 - -
Trme8569g00001 102 SUPERFAMILY Calcium ATPase, transduction domain A 22 102 IPR008250 -
Trme8569g00001 102 Gene3D - 2 102 - -
Trme8569g00001 102 Pfam E1-E2 ATPase 21 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8569g00001 Trme-Chr8569 331 882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8569g00001 1 102 Primary Pumps ATPases AT3G21180 87.255 6.48e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8569g00001 K01537 - vvo:131651368 196.438