Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85635g00001 CCCACTCTTAGGGAAGCCAAGCGCATATATAGCCAGTTGACCCTAGTATCCTATGAAGCAGATGAGAAGGAAATTTTACAAAGCAACCAGCAGGACGTGGTGCCAACTCGCATTGCTAAAAGAAATGGCACCCCACCTGTCAGCAAAGTGGACATGGCTGGGATGGATGAAAACAATAAAGCTGAAGCTTGTTCCAGTAACAAAAATGATGAACCTCTTATTTCGAGTAATGACGAAAGTGAGAATGAGTTACCTGTTAAATCAACTCCTTTACATCAAGCAGCACAATCTGGTGACTCTGAAAAGGTTATGGAACTCCTGGAACAGGGCTTGGATCCATGCATTAAAGATGAAAGGGGACGGACTCCATATATGTTGGCACCTGACAAGGAAGTCAGGAACACTTTCAGAAGGTTTATGGCTTCAAATCTTGACAAATGGGATTGGAATGCTGCAAAAGTTCCGAGTGCATTGACCAAAGAATTGGAAGAATCACAAGCTGCTAAGCAG 510 0.4353 PTLREAKRIYSQLTLVSYEADEKEILQSNQQDVVPTRIAKRNGTPPVSKVDMAGMDENNKAEACSSNKNDEPLISSNDESENELPVKSTPLHQAAQSGDSEKVMELLEQGLDPCIKDERGRTPYMLAPDKEVRNTFRRFMASNLDKWDWNAAKVPSALTKELEESQAAKQ 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85635g00001 170 ProSiteProfiles Ankyrin repeat profile. 86 118 IPR002110 GO:0005515
Trme85635g00001 170 SUPERFAMILY Ankyrin repeat 87 142 IPR036770 -
Trme85635g00001 170 ProSiteProfiles Ankyrin repeat region circular profile. 86 118 - -
Trme85635g00001 170 MobiDBLite consensus disorder prediction 36 101 - -
Trme85635g00001 170 Gene3D - 48 156 IPR036770 -
Trme85635g00001 170 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1 170 IPR047139 -
Trme85635g00001 170 MobiDBLite consensus disorder prediction 60 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85635g00001 1 170 C2H2 Transcription Factor Family AT1G01930 47.222 1.56e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85635g00001 K26089 - gmx:100808912 254.988