Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme85625g00001 AAGAAACTCCCATACAAGGTTGTGATTCAGTTGGCTTTGGACCTCGCTAAAGGTCTTAGTTATCTACATTCGAGGAGAATTGTTCACCGCGATGTGAAAACTGATAATATGTTACTGGATGAGAACCAAAATTTGAAAATAGCTGATTTTGGTGTTGCTCGGGTTGAAGCGGTAAATCCAAGTGAAATGACTGGTGATACCGGAACCGTTGGGTATATGGCGCCAGAGGTGATTAATGGCAAGCCTTACAACAGAAGCTGTGATGTCTACAGCTTTGGCATTTGCTTATGGGAAATTTATTGCTGTGACATGCCTTATATGAACCTAAGCTTTGCTGACGCGTCAGCTGCAGTCGCTAATCGG 363 0.4325 KKLPYKVVIQLALDLAKGLSYLHSRRIVHRDVKTDNMLLDENQNLKIADFGVARVEAVNPSEMTGDTGTVGYMAPEVINGKPYNRSCDVYSFGICLWEIYCCDMPYMNLSFADASAAVANR 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme85625g00001 121 SUPERFAMILY Protein kinase-like (PK-like) 2 121 IPR011009 -
Trme85625g00001 121 ProSitePatterns Serine/Threonine protein kinases active-site signature. 27 39 IPR008271 GO:0004672|GO:0006468
Trme85625g00001 121 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 113 - -
Trme85625g00001 121 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Trme85625g00001 121 SMART serkin_6 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme85625g00001 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme85625g00001 121 Pfam Protein kinase domain 6 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme85625g00001 Trme-Chr85625 131 747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme85625g00001 1 121 MAP Kinase Kinase Kinase AT3G22750 79.339 1.81e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme85625g00001 Pkinase 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme85625g00001 - - mus:103990929 211.46