Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8540g00001 ATGTACGAGGTTGGTTTCTTACATGAAGATGCTCATAAAGAACTCTCTGTGAAGCAGGCAGAAATAAAGATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTATTCCTATATTCAGAGTCGATACTATAGATCTCCCGAGGTTCTTCTTGGATATCAGTATCCTAACCCATGA 183 0.3934 MYEVGFLHEDAHKELSVKQAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYPNP 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8540g00001 60 Gene3D Transferase(Phosphotransferase) domain 1 14 58 - -
Trme8540g00001 60 PANTHER DUAL SPECIFICITY PROTEIN KINASE 18 58 - -
Trme8540g00001 60 SUPERFAMILY Protein kinase-like (PK-like) 18 57 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8540g00001 23 57 EF-hand Containing Proteins AT5G22840 51.429 5.09e-07 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Trme8540g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8540g00001 K18670 - csin:114270447 87.0409