Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme8532g00001 ATGCATATTGGCATTCTTGCCGCTGCGGCTCATGCTGCTTCGAATAATAGCCCATTTACTGTATTTTATAATCCAAGGACTAGCCCCTGTGAATTTGTGATTCCATTGGCCAAGTATAATAAAGCCCTGTACACTCATGTTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACCGAGGATTCAGGAGTACGCAGATATATGGGCACAATCACTGGGATCAGTGACTTGGATCCTGCCAGATGGAAAAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGAGCGTCCAAGCAGGGTTTCAATTTGGGATATTGAACCTGTTGTGACTCCTTTCTACATTTGCCCCCCTCCGTTTTTTAGGCCAAAGTTCCCCAAGCAACCAGGAATGCCAGAAGACGAGTCTGAAATAGAAAATGCTTTCAAGAGAGCTATGCCGTGGCTTGGAGATGAACTCGGCATGAAAGATGCTTCAAGTTCAATCTTCCCCGGTTTAAGTTTAGTCCAATGGATGAGCATGCAGCAGAATAATAATCAGTTTTCTGCTCCTCAATCAGGACTTTTACCTCCATCCATGCTTTCATCAAACACAATGCATGCTAACCTTAACACCGATGATCCATCCAAGATATTGAACTTTCAATCCCCTGCTGGACTCTCTGCTCCAAGTCTTCAATTTAACAAACCTAATTTACCAAACCAAGTCAATCAATTGCAACAGTCGCCGAATACGTGGTCTCAACAGCAGCAACAGCAGCAGAAGATGCAGTCGATGTTGCAAACACCGTTAAACCAGCTGCAGCAACAACAACAACAACAGCAGCA 842 0.4418 MHIGILAAAAHAASNNSPFTVFYNPRTSPCEFVIPLAKYNKALYTHVSLGMRFRMMFETEDSGVRRYMGTITGISDLDPARWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESEIENAFKRAMPWLGDELGMKDASSSIFPGLSLVQWMSMQQNNNQFSAPQSGLLPPSMLSSNTMHANLNTDDPSKILNFQSPAGLSAPSLQFNKPNLPNQVNQLQQSPNTWSQQQQQQQKMQSMLQTPLNQLQQQQQQQQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme8532g00001 280 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 271 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme8532g00001 280 MobiDBLite consensus disorder prediction 187 280 - -
Trme8532g00001 280 FunFam Auxin response factor 46 118 - -
Trme8532g00001 280 Gene3D - 46 117 - -
Trme8532g00001 280 Pfam Auxin response factor 9 91 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme8532g00001 Trme-Chr8532 1 1453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme8532g00001 1 247 B3 DNA Binding Superfamily AT1G19220 73.600 6.94e-122 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme8532g00001 K14486 - lja:Lj6g3v1174050.2 433.335